Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015875293.1_cds_XP_016435755.1_31683
CDS Infomation

[gene=LOC107761971] [db_xref=GeneID:107761971] [protein=pentatricopeptide repeat-containing protein At1g31790-like] [partial=3'] [protein_id=XP_016435755.1] [location=complement(join(<78..195,277..391,462..1438))] [gbkey=CDS]
Sequence

ATGGACGGTCTTGCCCTTAACATACCTGTTGACATATACGTTTCCCTTATCAAAGGATGC
ACTGAATCACGTGACCCTTTAAAAGCTGTTGAACTTTATACCCATATTTGTAAAAGTGAT
GTTATTCCTAGCTTGCCGCTACTCAACCGTGTGTTGTTGATGCTTGTGTCTTGTGGTTGT
TTTCAACATGCGCGTCAACTGTTTGATAAAATGCGCCTCAGAAATTCTAAGTCTTGGGCT
GCGATAATTGCGGGTTGTGTTGAAAATGATGAGTGTGAAGAAGCTTTGCGTTTGTTTTTG
GCAATGCAGAGTGAGACAGTGAACTTATGTAAATGTGGTGATTTAATTGATGATGGGATT
TTGGTCTGTGTCCTTAAGGCTTGTGTGGAAATGATGAATTTAGAACTTGGGAAACAGATT
CACGGGTGGTTAATTAAGGTGGGAAGTTGTGAAAGCTTGGCTTTGAGTAGTTTCTTGATC
AAGTTCTATGGAGAGTTTGGTTATCTAGAAAGCGCTGACAATGTGTTCGATCATGTTCCA
CATTGTAATACAGTTGTTTGGACAGCTAGAATTGGCAATTTGTGCAAAGAGGAGCAGTTT
GAAGGGGCTATAAGAATTTTCAGGGAGATGGTAAGAGAAGGAGTTAAAAAAAATAGTTTT
ACATTTTCAAGTGTTCTTAAAGCTTGCGGGAAGTTGAGGGATTGTGGTCAACAGGTTCAT
GCTAGTTCTATCAAGGTAGGACTTGATATGGATGGTTACGTGCAGTGTAGCTTGATTGAC
ATGTATGGAAAATATGGGTTGCTGAGGGACGCACTGAGGGTTTTTTATGCGAGAGAGGAT
AAGAGTAATATTGCCTGCTGGAATGCAATGCTGATGGGATGTATACACAATGGTCTCGGT
ATTGAAGCCATAAAGGTTCTCTATGAGATGAAAAAAGCTGGTTTGCAACCACATGAATCT
TTGATTAAAGAAGTGTTATATGAAGATGATTCGCGTGATGAAGGAATTTTTCCGGAATAT
AATGCAGCCGGTGAAGTGGCTAATGTCTCTAATTTCTCTGATGAGTTGGTTGCATTTCAA
GGATCAACAAGGATGATTTGCAAGATCAAGGAATTTGTCATGGAATGTAATGCAGTCAAC
ACCTATGCATTGGCAATTATCTCCGGTTTCTTTTATGAGTTAGTTGCATTTCTAGGATCA
ACGAGGCTAT

Peptide Sequence

PEP ID

XP_016435755.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g31790-like, partial [Nicotiana tabacum]
Sequence

MDGLALNIPVDIYVSLIKGCTESRDPLKAVELYTHICKSDVIPSLPLLNRVLLMLVSCGC
FQHARQLFDKMRLRNSKSWAAIIAGCVENDECEEALRLFLAMQSETVNLCKCGDLIDDGI
LVCVLKACVEMMNLELGKQIHGWLIKVGSCESLALSSFLIKFYGEFGYLESADNVFDHVP
HCNTVVWTARIGNLCKEEQFEGAIRIFREMVREGVKKNSFTFSSVLKACGKLRDCGQQVH
ASSIKVGLDMDGYVQCSLIDMYGKYGLLRDALRVFYAREDKSNIACWNAMLMGCIHNGLG
IEAIKVLYEMKKAGLQPHESLIKEVLYEDDSRDEGIFPEYNAAGEVANVSNFSDELVAFQ
GSTRMICKIKEFVMECNAVNTYALAIISGFFYELVAFLGSTRL

Transcript Sequence

Gene sequence data has not been registered.